Updated Commands (markdown)

Commands.md

@@ -112,7 +112,13 @@
 #### Description
 `Create a new PlotArea`
 #### Usage
-`/plot area <create|info|list|tp|regen>`
+##### Primary
+ - `/plot area <create|info|list|tp|regen>`
+##### Other Usages
+ - `/plot visit [area]`
+ - `/plot area create [world[:type]] [<modifier>=<value>]...`
+ - `/plot area list [#]`
+ - `/plot area info [area]`
 #### Aliases
 `[ world ]`
 #### Permissions
@@ -152,7 +158,11 @@
 #### Description
 `Mark a plot as done`
 #### Usage
-`/plot bo3`
+##### Primary
+ - `/plot bo3`
+##### Other Usages
+ - `/plot bo3 export [category] [alias] [-r]`
+ - `/plot bo3 import <file>`
 #### Aliases
 `[ bo2 ]`
 #### Permissions
@@ -211,7 +221,10 @@
 #### Description
 `Clear a plot`
 #### Usage
-`/plot clear [type]`
+##### Primary
+ - `/plot clear [type]`
+##### Other Usages
+ - `/plot clear [X;Z|mine]`
 #### Permissions
 ##### Primary
  - `plots.clear`    
@@ -227,7 +240,20 @@
 #### Description
 `Manage a plot cluster`
 #### Usage
-`/plot cluster`
+##### Primary
+ - `/plot cluster`
+##### Other Usages
+ - `/plot cluster resize <pos1> <pos2>`
+ - `/plot cluster leave [name]`
+ - `/plot cluster info [name]`
+ - `/plot cluster delete [name]`
+ - `/plot cluster list`
+ - `/plot cluster invite <player>`
+ - `/plot cluster sethome`
+ - `/plot cluster helpers <add|remove> <player>`
+ - `/plot cluster create <name> <type-bot> <type-top>`
+ - `/plot cluster tp <name>`
+ - `/plot cluster kick <player>`
 #### Aliases
 `[ clusters ]`
 #### Permissions
@@ -393,7 +419,14 @@
 #### Description
 `Mutli-purpose debug command`
 #### Usage
-`/plot debugexec`
+##### Primary
+ - `/plot debugexec`
+##### Other Usages
+ - `/plot debugexec remove-flag <flag>`
+ - `/plot debugexec allcmd <condition> <command>`
+ - `/plot debugexec all <condition> <code>`
+ - `/plot debugexec addcmd <file>`
+ - `/plot debugexec analyze <threshold>`
 #### Aliases
 `[ exec ]`
 #### Permissions
@@ -611,7 +644,10 @@
 #### Description
 `List plots`
 #### Usage
-`/plot list <forsale|mine|shared|world|top|all|unowned|unknown|player|world|done|fuzzy <search...>> [#]`
+##### Primary
+ - `/plot list <forsale|mine|shared|world|top|all|unowned|unknown|player|world|done|fuzzy <search...>> [#]`
+##### Other Usages
+ - `/plot list fuzzy <search...> [#]`
 #### Aliases
 `[ search,find,l ]`
 #### Permissions
@@ -641,7 +677,10 @@
 #### Description
 `Load your plot`
 #### Usage
-`/plot restore`
+##### Primary
+ - `/plot restore`
+##### Other Usages
+ - `/plot load <index>`
 #### Aliases
 `[ restore ]`
 #### Permissions
@@ -657,7 +696,10 @@
 #### Description
 `Merge the plot you are standing on, with another plot`
 #### Usage
-`/plot merge <all|n|e|s|w> [removeroads]`
+##### Primary
+ - `/plot merge <all|n|e|s|w> [removeroads]`
+##### Other Usages
+ - `/plot merge < <arg> | <arg> > [removeroads]`
 #### Aliases
 `[ m ]`
 #### Permissions
@@ -695,7 +737,10 @@ Legally stolen from https://github.com/manuelgu/PlotSquaredMiddle
 #### Description
 `Move a plot`
 #### Usage
-`/plot move <X;Z>`
+##### Primary
+ - `/plot move <X;Z>`
+##### Other Usages
+ - `/plot copy <X;Z>`
 #### Aliases
 `[ debugmove ]`
 #### Permissions
@@ -906,7 +951,15 @@ plot flag add use 2,4
 plot flag list
 ```
 #### Usage
-`/plot flag <set|remove|add|list|info>  <value>`
+##### Primary
+ - `/plot flag <set|remove|add|list|info>  <value>`
+##### Other Usages
+ - `/plot flag info <flag>`
+ - `/plot flag <set|remove|add|list|info>`
+ - `/plot flag add <flag> <values>`
+ - `/plot flag list`
+ - `/plot flag set <flag> <value>`
+ - `/plot flag remove <flag> [values]`
 #### Aliases
 `[ setf,flag,f,setflag ]`
 #### Permissions
@@ -969,7 +1022,10 @@ plot flag list
 #### Description
 `Swap two plots`
 #### Usage
-`/plot swap <X;Z>`
+##### Primary
+ - `/plot swap <X;Z>`
+##### Other Usages
+ - `/plot copy <X;Z>`
 #### Aliases
 `[ switch ]`
 #### Permissions
@@ -996,7 +1052,12 @@ plot flag list
 #### Description
 `Create or use a world template`
 #### Usage
-`/plot template [import|export] <world> <template>`
+##### Primary
+ - `/plot template [import|export] <world> <template>`
+##### Other Usages
+ - `/plot template <import|export> <world> [template]`
+ - `/plot template export <world>`
+ - `/plot template import <world> <template>`
 #### Permissions
 ##### Primary
  - `plots.admin`    
@@ -1104,7 +1165,10 @@ plot flag list
 #### Description
 `Update PlotSquared`
 #### Usage
-`/plot update`
+##### Primary
+ - `/plot update`
+##### Other Usages
+ - `/plot update [url]`
 #### Aliases
 `[ updateplugin ]`
 #### Permissions
@@ -1117,7 +1181,10 @@ plot flag list
 #### Description
 `Visit someones plot`
 #### Usage
-`/plot visit [player|alias|world|type] [#]`
+##### Primary
+ - `/plot visit [player|alias|world|type] [#]`
+##### Other Usages
+ - `/plot visit <arg> [#]`
 #### Aliases
 `[ goto,v,teleport,tp ]`
 #### Permissions