diff --git a/wp-admin/includes/class-wp-debug-data.php b/wp-admin/includes/class-wp-debug-data.php
index 4708e6187c..5ffec9825f 100644
--- a/wp-admin/includes/class-wp-debug-data.php
+++ b/wp-admin/includes/class-wp-debug-data.php
@@ -728,7 +728,7 @@ class WP_Debug_Data {
 		if ( isset( $wpdb->use_mysqli ) && $wpdb->use_mysqli ) {
 			$client_version = $wpdb->dbh->client_info;
 		} else {
-			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_client_info
+			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_client_info,PHPCompatibility.Extensions.RemovedExtensions.mysql_DeprecatedRemoved
 			if ( preg_match( '|[0-9]{1,2}\.[0-9]{1,2}\.[0-9]{1,2}|', mysql_get_client_info(), $matches ) ) {
 				$client_version = $matches[0];
 			} else {
diff --git a/wp-admin/includes/class-wp-site-health.php b/wp-admin/includes/class-wp-site-health.php
index 5f7c6bc7b7..27b29ad76f 100644
--- a/wp-admin/includes/class-wp-site-health.php
+++ b/wp-admin/includes/class-wp-site-health.php
@@ -158,7 +158,7 @@ class WP_Site_Health {
 			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysqli_get_server_info
 			$mysql_server_type = mysqli_get_server_info( $wpdb->dbh );
 		} else {
-			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_server_info
+			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_server_info,PHPCompatibility.Extensions.RemovedExtensions.mysql_DeprecatedRemoved
 			$mysql_server_type = mysql_get_server_info( $wpdb->dbh );
 		}
 
@@ -1171,7 +1171,7 @@ class WP_Site_Health {
 			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysqli_get_client_info
 			$mysql_client_version = mysqli_get_client_info();
 		} else {
-			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_client_info
+			// phpcs:ignore WordPress.DB.RestrictedFunctions.mysql_mysql_get_client_info,PHPCompatibility.Extensions.RemovedExtensions.mysql_DeprecatedRemoved
 			$mysql_client_version = mysql_get_client_info();
 		}
 
diff --git a/wp-admin/includes/file.php b/wp-admin/includes/file.php
index 11977a8662..9cd626ec0b 100644
--- a/wp-admin/includes/file.php
+++ b/wp-admin/includes/file.php
@@ -1280,6 +1280,7 @@ function verify_file_signature( $filename, $signatures, $filename_for_errors = f
 			),
 			array(
 				'php'    => phpversion(),
+				// phpcs:ignore PHPCompatibility.Constants.NewConstants.sodium_library_versionFound
 				'sodium' => defined( 'SODIUM_LIBRARY_VERSION' ) ? SODIUM_LIBRARY_VERSION : ( defined( 'ParagonIE_Sodium_Compat::VERSION_STRING' ) ? ParagonIE_Sodium_Compat::VERSION_STRING : false ),
 			)
 		);
@@ -1313,6 +1314,7 @@ function verify_file_signature( $filename, $signatures, $filename_for_errors = f
 				),
 				array(
 					'php'                => phpversion(),
+					// phpcs:ignore PHPCompatibility.Constants.NewConstants.sodium_library_versionFound
 					'sodium'             => defined( 'SODIUM_LIBRARY_VERSION' ) ? SODIUM_LIBRARY_VERSION : ( defined( 'ParagonIE_Sodium_Compat::VERSION_STRING' ) ? ParagonIE_Sodium_Compat::VERSION_STRING : false ),
 					'polyfill_is_fast'   => false,
 					'max_execution_time' => ini_get( 'max_execution_time' ),
@@ -1386,6 +1388,7 @@ function verify_file_signature( $filename, $signatures, $filename_for_errors = f
 			'skipped_key' => $skipped_key,
 			'skipped_sig' => $skipped_signature,
 			'php'         => phpversion(),
+			// phpcs:ignore PHPCompatibility.Constants.NewConstants.sodium_library_versionFound
 			'sodium'      => defined( 'SODIUM_LIBRARY_VERSION' ) ? SODIUM_LIBRARY_VERSION : ( defined( 'ParagonIE_Sodium_Compat::VERSION_STRING' ) ? ParagonIE_Sodium_Compat::VERSION_STRING : false ),
 		)
 	);
diff --git a/wp-admin/includes/upgrade.php b/wp-admin/includes/upgrade.php
index 79a23a6308..3b2d62da7c 100644
--- a/wp-admin/includes/upgrade.php
+++ b/wp-admin/includes/upgrade.php
@@ -2475,7 +2475,7 @@ function get_alloptions_110() {
  * @param string $setting Option name.
  * @return mixed
  */
-function __get_option( $setting ) { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __get_option( $setting ) { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	global $wpdb;
 
 	if ( $setting == 'home' && defined( 'WP_HOME' ) ) {
diff --git a/wp-includes/author-template.php b/wp-includes/author-template.php
index 878fb9e409..a14b628909 100644
--- a/wp-includes/author-template.php
+++ b/wp-includes/author-template.php
@@ -565,6 +565,6 @@ function is_multi_author() {
  * @since 3.2.0
  * @access private
  */
-function __clear_multi_author_cache() { //phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __clear_multi_author_cache() { //phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	delete_transient( 'is_multi_author' );
 }
diff --git a/wp-includes/deprecated.php b/wp-includes/deprecated.php
index 215213f70b..98da670cc1 100644
--- a/wp-includes/deprecated.php
+++ b/wp-includes/deprecated.php
@@ -1798,7 +1798,7 @@ function _nc( $single, $plural, $number, $domain = 'default' ) {
  * @deprecated 2.8.0 Use _n()
  * @see _n()
  */
-function __ngettext( ...$args ) {
+function __ngettext( ...$args ) { // phpcs:ignore PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	_deprecated_function( __FUNCTION__, '2.8.0', '_n()' );
 	return _n( ...$args );
 }
@@ -1810,7 +1810,7 @@ function __ngettext( ...$args ) {
  * @deprecated 2.8.0 Use _n_noop()
  * @see _n_noop()
  */
-function __ngettext_noop( ...$args ) {
+function __ngettext_noop( ...$args ) { // phpcs:ignore PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	_deprecated_function( __FUNCTION__, '2.8.0', '_n_noop()' );
 	return _n_noop( ...$args );
 
diff --git a/wp-includes/functions.php b/wp-includes/functions.php
index d3dded8078..c49b0e0e7e 100644
--- a/wp-includes/functions.php
+++ b/wp-includes/functions.php
@@ -5743,7 +5743,7 @@ function get_file_data( $file, $default_headers, $context = '' ) {
  *
  * @return true True.
  */
-function __return_true() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_true() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return true;
 }
 
@@ -5758,7 +5758,7 @@ function __return_true() { // phpcs:ignore WordPress.NamingConventions.ValidFunc
  *
  * @return false False.
  */
-function __return_false() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_false() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return false;
 }
 
@@ -5771,7 +5771,7 @@ function __return_false() { // phpcs:ignore WordPress.NamingConventions.ValidFun
  *
  * @return int 0.
  */
-function __return_zero() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_zero() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return 0;
 }
 
@@ -5784,7 +5784,7 @@ function __return_zero() { // phpcs:ignore WordPress.NamingConventions.ValidFunc
  *
  * @return array Empty array.
  */
-function __return_empty_array() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_empty_array() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return array();
 }
 
@@ -5797,7 +5797,7 @@ function __return_empty_array() { // phpcs:ignore WordPress.NamingConventions.Va
  *
  * @return null Null value.
  */
-function __return_null() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_null() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return null;
 }
 
@@ -5812,7 +5812,7 @@ function __return_null() { // phpcs:ignore WordPress.NamingConventions.ValidFunc
  *
  * @return string Empty string.
  */
-function __return_empty_string() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __return_empty_string() { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	return '';
 }
 
diff --git a/wp-includes/general-template.php b/wp-includes/general-template.php
index 28d0e399e9..32d5595bb1 100644
--- a/wp-includes/general-template.php
+++ b/wp-includes/general-template.php
@@ -4684,7 +4684,7 @@ function readonly( $readonly, $current = true, $echo = true ) {
  * @param string $type    The type of checked|selected|disabled|readonly we are doing
  * @return string html attribute or empty string
  */
-function __checked_selected_helper( $helper, $current, $echo, $type ) { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore
+function __checked_selected_helper( $helper, $current, $echo, $type ) { // phpcs:ignore WordPress.NamingConventions.ValidFunctionName.FunctionDoubleUnderscore,PHPCompatibility.FunctionNameRestrictions.ReservedFunctionNames.FunctionDoubleUnderscore
 	if ( (string) $helper === (string) $current ) {
 		$result = " $type='$type'";
 	} else {
diff --git a/wp-includes/version.php b/wp-includes/version.php
index c5be1abbc9..1eca9eefd4 100644
--- a/wp-includes/version.php
+++ b/wp-includes/version.php
@@ -13,7 +13,7 @@
  *
  * @global string $wp_version
  */
-$wp_version = '5.3-beta1-46289';
+$wp_version = '5.3-beta1-46290';
 
 /**
  * Holds the WordPress DB revision, increments when changes are made to the WordPress DB schema.